PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Phylogenetic Tree for
Linum usitatissimum
M-type_MADS Family
Phylogenetic tree for domain ? help Back to Top

      /------------------------------------------------------------------- Lus10012656/7-44   (1)
      |                                                                               
      |------------------------------------------------------------------- Lus10024347/6-44   (61)
      |                                                                               
      |                                                /------------------ Lus10007713/11-56  (2)
      |                                                |                              
      |                                          /--97-+     /------------ Lus10007711/11-49  (10)
      |                                          |     |     |                        
      |                                          |     \--55-+     /------ Lus10004459/3-30   (11)
      |                                          |           \-100-+                  
      |                                          |                 \------ Lus10000400/3-30   (67)
      |                                          |                                    
      |                                          |                 /------ Lus10016180/11-48  (5)
      |                                    /--68-+           /-100-+                  
      |                                    |     |           |     \------ Lus10029367/11-49  (14)
      |                                    |     |-----88----+                        
      |                                    |     |           |     /------ Lus10032108/11-52  (28)
      |                                    |     |           \--87-+                  
      |                                    |     |                 \------ Lus10014578/11-52  (66)
      |                                    |     |                                    
      |                             /--75--+     \------------------------ Lus10014883/11-48  (46)
      |                             |      |                                          
      |                             |      |                       /------ Lus10022325/6-43   (16)
      |                             |      |-----------89----------+                  
      |                             |      |                       \------ Lus10004150/10-50  (43)
      |                       /--85-+      |                                          
      |                       |     |      \------------------------------ Lus10022316/11-48  (32)
      |                       |     |                                                 
      |                       |     |                              /------ Lus10028653/10-50  (21)
      |                       |     \--------------100-------------+                  
      |                       |                                    \------ Lus10000974/10-50  (22)
      |                       |                                                       
      |                       |                                    /------ Lus10020789/3-43   (8)
      |           /-----63----+                              /--88-+                  
      |           |           |                              |     \------ Lus10007371/10-50  (18)
      |           |           |--------------100-------------+                        
      |           |           |                              |     /------ Lus10014095/11-51  (27)
      |           |           |                              \-100-+                  
      |           |           |                                    \------ Lus10019819/10-51  (65)
      |           |           |                                                       
      |           |           \------------------------------------------- Lus10021399/9-50   (50)
      |           |                                                                   
      |           |                                                /------ Lus10012449/4-50   (3)
      |           |                                          /--98-+                  
      |           |                                          |     \------ Lus10020511/7-50   (45)
      |           |     /-----------------58-----------------+                        
      |           |     |                                    |     /------ Lus10030663/17-65  (47)
      |           |     |                                    \--87-+                  
      +           |     |                                          \------ Lus10030824/19-65  (57)
      |           |     |                                                             
      |           |     |                                    /------------ Lus10011456/10-42  (4)
      |           |     |                                    |                        
      |           |     |                  /--------66-------+     /------ Lus10022505/9-51   (25)
      |           |     |                  |                 \-100-+                  
      |           |     |                  |                       \------ Lus10016809/9-51   (56)
      |           |     |                  |                                          
      |           |     |                  |                       /------ Lus10024823/9-58   (6)
      |           |     |                  |-----------82----------+                  
      |           |     |                  |                       \------ Lus10018714/9-58   (9)
      |           |     |                  |                                          
      |     /-100-+     |                  |                       /------ Lus10039704/11-55  (23)
      |     |     |     |                  |----------100----------+                  
      |     |     |     |           /--55--+                       \------ Lus10018493/10-55  (51)
      |     |     |     |           |      |                                          
      |     |     |     |           |      |           /------------------ Lus10034464/10-53  (38)
      |     |     |     |           |      |           |                              
      |     |     |     |           |      |           |           /------ Lus10037166/10-53  (42)
      |     |     |     |           |      |     /--57-+     /-100-+                  
      |     |     |     |           |      |     |     |     |     \------ Lus10036761/10-53  (53)
      |     |     |     |           |      |     |     |     |                        
      |     |     |     |           |      |     |     \-100-+------------ Lus10030450/10-53  (48)
      |     |     |     |           |      \-100-+           |                        
      |     |     |     |           |            |           \------------ Lus10026613/10-53  (62)
      |     |     |     |           |            |                                    
      |     |     |     |     /--57-+            \------------------------ Lus10019089/9-53   (63)
      |     |     |     |     |     |                                                 
      |     |     |     |     |     |------------------------------------- Lus10036543/10-59  (13)
      |     |     |     |     |     |                                                 
      |     |     |     |     |     |------------------------------------- Lus10011349/9-59   (19)
      |     |     |     |     |     |                                                 
      |     |     |     |     |     |                              /------ Lus10028214/10-59  (33)
      |     |     |     |     |     |                        /--94-+                  
      |     |     |     |     |     |                        |     \------ Lus10042918/10-59  (58)
      |     |     |     |     |     |-----------100----------+                        
      |     |     |     |     |     |                        \------------ Lus10029556/10-59  (55)
      |     |     |     |     |     |                                                 
      |     |     \--97-+--56-+     \------------------------------------- Lus10002763/26-76  (35)
      |     |           |     |                                                       
      |     |           |     |                                    /------ Lus10037039/9-59   (17)
      |     |           |     |                              /-100-+                  
      |     |           |     |                              |     \------ Lus10015766/9-59   (20)
      |     |           |     |--------------90--------------+                        
      |     |           |     |                              |     /------ Lus10035029/10-59  (26)
      |     |           |     |                              \--57-+                  
      |     |           |     |                                    \------ Lus10003123/9-59   (39)
      |     |           |     |                                                       
      \--51-+           |     |                                    /------ Lus10041548/10-58  (52)
            |           |     \-----------------100----------------+                  
            |           |                                          \------ Lus10012545/10-58  (60)
            |           |                                                             
            |           |                                    /------------ Lus10011787/11-53  (7)
            |           |                                    |                        
            |           |-----------------100----------------+     /------ Lus10016563/11-56  (31)
            |           |                                    \--55-+                  
            |           |                                          \------ Lus10040832/11-56  (37)
            |           |                                                             
            |           |                                          /------ Lus10028490/41-90  (15)
            |           |                                    /-100-+                  
            |           |                                    |     \------ Lus10028473/41-90  (41)
            |           |                              /-100-+                        
            |           |                              |     \------------ Lus10025872/42-91  (40)
            |           |--------------94--------------+                              
            |           |                              \------------------ Lus10015271/20-67  (59)
            |           |                                                             
            |           |                                          /------ Lus10042291/61-104 (24)
            |           |--------------------100-------------------+                  
            |           |                                          \------ Lus10026366/44-87  (49)
            |           |                                                             
            |           |                              /------------------ Lus10015726/23-68  (29)
            |           |                              |                              
            |           |                              |           /------ Lus10003940/38-83  (30)
            |           |--------------100-------------+     /-100-+                  
            |           |                              |     |     \------ Lus10037450/36-81  (44)
            |           |                              \--88-+                        
            |           |                                    \------------ Lus10003481/22-67  (54)
            |           |                                                             
            |           |                                          /------ Lus10035456/3-50   (34)
            |           \--------------------89--------------------+                  
            |                                                      \------ Lus10031073/3-50   (64)
            |                                                                         
            |------------------------------------------------------------- Lus10022594/6-44   (12)
            |                                                                         
            \------------------------------------------------------------- Lus10021494/6-44   (36)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      Subtree rooted at node 114:

                                                          /--------------- Lus10022325 (3)
                                                          |                           
                                                          |         /----- Lus10007711 (8)
                                                    /--99-+    /-100+                 
                                                    |     |    |    \----- Lus10007713 (42)
                                                    |     \-96-+                      
                                                    |          |    /----- Lus10000400 (10)
                                               /-100+          \-100+                 
                                               |    |               \----- Lus10004459 (15)
                                               |    |                                 
                                               |    |               /----- Lus10022316 (5)
                                          /-100+    \------100------+                 
                                          |    |                    \----- Lus10014883 (66)
                                          |    |                                      
                                          |    |                    /----- Lus10014578 (58)
                                          |    \---------100--------+                 
                                          |                         \----- Lus10032108 (67)
                                          |                                           
                                          |                         /----- Lus10016180 (33)
                                     /-81-+                    /-100+                 
                                     |    |                    |    \----- Lus10029367 (61)
                                     |    |---------100--------+                      
                                     |    |                    |    /----- Lus10004150 (37)
                                     |    |                    \-75-+                 
                                     |    |                         \----- Lus10021399 (38)
                                     |    |                                           
                                     |    |                         /----- Lus10000974 (43)
                                     |    \-----------100-----------+                 
                                /-100+                              \----- Lus10028653 (60)
                                |    |                                                
                                |    |                              /----- Lus10022594 (13)
                                |    |                         /-100+                 
                                |    |                         |    \----- Lus10021494 (35)
                                |    |                    /-100+                      
                                |    |                    |    |    /----- Lus10012656 (24)
                                |    |                    |    \-97-+                 
                                |    |                    |         \----- Lus10024347 (53)
                                |    \---------55---------+                           
                                |                         |         /----- Lus10014095 (21)
                                |                         |    /-100+                 
                                |                         |    |    \----- Lus10019819 (63)
                                |                         \-100+                      
                                |                              |    /----- Lus10007371 (22)
                                |                              \-100+                 
                                |                                   \----- Lus10020789 (45)
                                |                                                     
                                |                                   /----- Lus10026366 (4)
                                |                         /---100---+                 
                           /-50-+                         |         \----- Lus10042291 (6)
                           |    |                         |                           
                           |    |                         |         /----- Lus10037450 (23)
                           |    |              /----91----+    /-100+                 
                           |    |              |          |    |    \----- Lus10003940 (29)
                           |    |              |          |    |                      
                           |    |              |          \-100+---------- Lus10003481 (47)
                           |    |              |               |                      
                           |    |              |               \---------- Lus10015726 (62)
                           |    |              |                                      
                           |    |              |-------------------------- Lus10011456 (14)
                           |    |              |                                      
                           |    |              |               /---------- Lus10025872 (16)
                           |    |              |               |                      
                           |    |              |          /-100+    /----- Lus10028490 (18)
                           |    |              |          |    \-100+                 
                           |    |              |    /--70-+         \----- Lus10028473 (30)
                           |    |              |    |     |                           
                           |    |              |    |     \--------------- Lus10015271 (34)
                           |    \------87------+-61-+                                 
                     /--67-+                   |    |               /----- Lus10035456 (41)
                     |     |                   |    \------100------+                 
                     |     |                   |                    \----- Lus10031073 (48)
                     |     |                   |                                      
                     |     |                   |                    /----- Lus10012449 (28)
                     |     |                   |---------100--------+                 
                     |     |                   |                    \----- Lus10020511 (44)
                     |     |                   |                                      
                     |     |                   |                    /----- Lus10030824 (31)
                     |     |                   |---------100--------+                 
                     |     |                   |                    \----- Lus10030663 (57)
                     |     |                   |                                      
                     |     |                   |                    /----- Lus10040832 (39)
                     |     |                   |               /-74-+                 
                /-63-+     |                   |               |    \----- Lus10016563 (55)
                |    |     |                   \------100------+                      
                |    |     |                                   \---------- Lus10011787 (46)
                |    |     |                                                          
                |    |     |                                        /----- Lus10039704 (19)
                |    |     \-------------------100------------------+                 
                |    |                                              \----- Lus10018493 (36)
                |    |                                                                
                |    |                                              /----- Lus10030450 (12)
                |    |                                         /-100+                 
                |    |                                         |    \----- Lus10026613 (50)
           /-80-+    |                                    /-100+                      
           |    |    |                                    |    |    /----- Lus10037166 (27)
           |    |    |                                    |    \-100+                 
           |    |    \-----------------100----------------+         \----- Lus10036761 (54)
           |    |                                         |                           
           |    |                                         |         /----- Lus10034464 (32)
           |    |                                         \---100---+                 
      --84-+    |                                                   \----- Lus10019089 (65)
           |    |                                                                     
           |    |                                                   /----- Lus10016809 (11)
           |    \------------------------100------------------------+                 
           |                                                        \----- Lus10022505 (59)
           |                                                                          
           |                                                        /----- Lus10024823 (7)
           \---------------------------100--------------------------+                 
                                                                    \----- Lus10018714 (40)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- Lus10029556 (1)
      |                                                                               
      |                                                     /------------- (114)
      |            /-------------------53-------------------+                         
      |            |                                        \------------- Lus10036543 (26)
      |            |                                                                  
      |            |                                        /------------- Lus10015766 (9)
      |            |                          /-----100-----+                         
      |            |                          |             \------------- Lus10037039 (17)
      |            |             /-----95-----+                                       
      |            |             |            |             /------------- Lus10035029 (25)
      |-----100----+             |            \------69-----+                         
      +            |------79-----+                          \------------- Lus10003123 (49)
      |            |             |                                                    
      |            |             |                          /------------- Lus10012545 (20)
      |            |             \------------100-----------+                         
      |            |                                        \------------- Lus10041548 (64)
      |            |                                                                  
      |            |                                        /------------- Lus10002763 (52)
      |            \-------------------75-------------------+                         
      |                                                     \------------- Lus10011349 (56)
      |                                                                               
      |                                                     /------------- Lus10042918 (2)
      \-------------------------100-------------------------+                         
                                                            \------------- Lus10028214 (51)